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  5. Pp1s223_59V6

Pp1s223_59V6


Description : pentatricopeptide repeat-containing


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s223_59V6
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Brara.A02054.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
HORVU3Hr1G067620.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Seita.2G230200.1 No alias alpha amylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004556 alpha-amylase activity IEA InterProScan predictions
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 481 541
IPR006047 Glyco_hydro_13_cat_dom 174 460
No external refs found!