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  5. Pp1s224_36V6

Pp1s224_36V6


Description : 50s ribosomal protein chloroplast


Gene families : OG_42_0005394 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s224_36V6
Cluster HCCA clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
A4A49_13639 No alias 50s ribosomal protein l29, chloroplastic 0.03 Orthogroups_2024-Update
Bradi3g58780 No alias Ribosomal L29 family protein 0.07 Orthogroups_2024-Update
Brara.B03943.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Brara.F02392.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.05G178000 No alias Ribosomal L29 family protein 0.02 Orthogroups_2024-Update
Glyma.08G135000 No alias Ribosomal L29 family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G078290.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Kfl00134_0120 kfl00134_0120_v1.1 (q9swi6|rk29_maize : 81.6) 50S ribosomal protein L29,... 0.03 Orthogroups_2024-Update
MA_10431457g0010 No alias (at5g65220 : 152.0) Ribosomal L29 family protein ;... 0.03 Orthogroups_2024-Update
Potri.007G093700 No alias Ribosomal L29 family protein 0.1 Orthogroups_2024-Update
Seita.1G324700.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sobic.004G231800.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Solyc03g097950 No alias 50S ribosomal protein L29 (AHRD V3.3 *** F4YFA4_CAMSI) 0.04 Orthogroups_2024-Update
Solyc06g072470 No alias zinc finger (C2H2 type) family protein (AHRD V3.3 --*... 0.06 Orthogroups_2024-Update
Sopen03g028660 No alias Ribosomal L29 protein 0.03 Orthogroups_2024-Update
Sopen06g028840 No alias Ribosomal L29 protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!