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  5. Pp1s226_110V6

Pp1s226_110V6


Description : dna binding


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s226_110V6
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
At4g17695 No alias Probable transcription factor KAN3... 0.02 Orthogroups_2024-Update
Bradi1g39180 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Brara.E01728.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.09G171100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G332300.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 58 108
No external refs found!