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  5. Pp1s227_93V6

Pp1s227_93V6


Description : C17L7.240; polyubiquitin (UBQ10) (SEN3) [Arabidopsis thaliana]


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s227_93V6
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
162003 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
270468 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Cre13.g563900 No alias ubiquitin 12 0.01 Orthogroups_2024-Update
Glyma.13G138600 No alias ubiquitin 4 0.04 Orthogroups_2024-Update
HORVU3Hr1G110970.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G026200.5 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G026260.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G029070.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Kfl00013_0160 kfl00013_0160_v1.... (at5g03240 : 110.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
LOC_Os08g08760 No alias ubiquitin family protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g17420.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Potri.004G094100 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Potri.007G123300 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Sobic.003G403700.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
No external refs found!