1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s22_145V6

Pp1s22_145V6


Description : MTI20.3; CER1 protein, putative [Arabidopsis thaliana]


Gene families : OG_42_0000480 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s22_145V6
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
At1g02205 No alias Fatty acid hydroxylase superfamily [Source:TAIR;Acc:AT1G02205] 0.02 Orthogroups_2024-Update
Bradi1g31140 No alias Fatty acid hydroxylase superfamily 0.02 Orthogroups_2024-Update
Brara.I05610.1 No alias aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.02 Orthogroups_2024-Update
Glyma.07G114200 No alias Fatty acid hydroxylase superfamily 0.02 Orthogroups_2024-Update
HORVU7Hr1G112710.2 No alias aldehyde-generating component *(CER3) of CER1-CER3... 0.02 Orthogroups_2024-Update
LOC_Os02g08230 No alias WAX2, putative, expressed 0.03 Orthogroups_2024-Update
Sopen07g002390 No alias WAX2 C-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
BP GO:0008610 lipid biosynthetic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 136 273
IPR021940 Uncharacterised_Wax2_C 455 625
No external refs found!