Pp1s22_171V6

Description : 40s ribosomal protein s30

Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s22_171V6
Cluster	HCCA clusters: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
227173	No alias	Ribosomal protein S30 family protein	0.12	Orthogroups_2024-Update
At2g19750	No alias	40S ribosomal protein S30...	0.03	Orthogroups_2024-Update
At4g29390	No alias	40S ribosomal protein S30...	0.05	Orthogroups_2024-Update
At5g56670	No alias	40S ribosomal protein S30...	0.02	Orthogroups_2024-Update
Bradi1g48060	No alias	Ribosomal protein S30 family protein	0.03	Orthogroups_2024-Update
Brara.A00791.1	No alias	component *(eS30) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.C01230.1	No alias	component *(eS30) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.I04721.1	No alias	component *(eS30) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Cre16.g666301	No alias	Ribosomal protein S30 family protein	0.15	Orthogroups_2024-Update
GRMZM2G054012	No alias	Ribosomal protein S30 family protein	0.05	Orthogroups_2024-Update
HORVU7Hr1G027760.1	No alias	component *(eS30) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
MA_10432727g0010	No alias	(at5g56670 : 97.4) Ribosomal protein S30 family protein;...	0.05	Orthogroups_2024-Update
Mp2g24290.1	No alias	component RPS30 of SSU proteome	0.03	Orthogroups_2024-Update
Mp8g09080.1	No alias	component RPS30 of SSU proteome	0.03	Orthogroups_2024-Update
PSME_00048165-RA	No alias	no hits & (original description: no original description)	0.11	Orthogroups_2024-Update
Potri.012G086600	No alias	Ribosomal protein S30 family protein	0.05	Orthogroups_2024-Update
Potri.014G147200	No alias	Ribosomal protein S30 family protein	0.07	Orthogroups_2024-Update
Potri.015G084700	No alias	Ribosomal protein S30 family protein	0.04	Orthogroups_2024-Update
Solyc08g076340	No alias	40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA)	0.08	Orthogroups_2024-Update
Solyc12g008700	No alias	peroxisomal ABC transporter 1 (AHRD V3.3 --* AT4G39850.4)	0.14	Orthogroups_2024-Update
evm.model.tig00001003.33	No alias	no hits & (original description: no original description)	0.1	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Predicted GO
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Predicted GO
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predicted GO
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
CC	GO:0016272	prefoldin complex	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
BP	GO:0022900	electron transport chain	IEP	Predicted GO
BP	GO:0022904	respiratory electron transport chain	IEP	Predicted GO
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predicted GO
CC	GO:0031090	organelle membrane	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
CC	GO:0045275	respiratory chain complex III	IEP	Predicted GO
BP	GO:0046034	ATP metabolic process	IEP	Predicted GO
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO
CC	GO:0070469	respiratory chain	IEP	Predicted GO
BP	GO:0070585	protein localization to mitochondrion	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0071806	protein transmembrane transport	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006846	Ribosomal_S30	3	59

External Links

No external refs found!

Pp1s22_171V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation