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  5. Pp1s23_181V6

Pp1s23_181V6


Description : contains ESTs AU093960(E1432),C72325(E1432) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s23_181V6
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_13049 No alias mannan endo-1,4-beta-mannosidase 6 0.02 Orthogroups_2024-Update
Glyma.03G002100 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g47400 No alias OsMan01 - Endo-Beta-Mannanase, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02520 No alias OsMan09 - Endo-Beta-Mannanase, expressed 0.02 Orthogroups_2024-Update
MA_955078g0010 No alias (at5g66460 : 462.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
PSME_00009478-RA No alias (at5g01930 : 536.0) Glycosyl hydrolase superfamily... 0.04 Orthogroups_2024-Update
PSME_00025496-RA No alias (at5g66460 : 454.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
PSME_00045003-RA No alias (at5g66460 : 453.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
PSME_00047131-RA No alias (at5g66460 : 457.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
Pp1s115_190V6 No alias (1-4)-beta-mannan endohydrolase (mannan endo- -beta-mannosidase) 0.04 Orthogroups_2024-Update
Seita.5G316000.1 No alias endo-beta-1,4-mannanase 0.05 Orthogroups_2024-Update
Solyc07g053920 No alias Mannan endo-1,4-beta-mannosidase 2 (AHRD V3.3 *** MAN2_ARATH) 0.03 Orthogroups_2024-Update
Sopen10g004160 No alias Cellulase (glycosyl hydrolase family 5) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 41 293
No external refs found!