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  5. Pp1s240_28V6

Pp1s240_28V6


Description : pyridoxine biosynthesis protein


Gene families : OG_42_0002804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002804_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s240_28V6
Cluster HCCA clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
At3g16050 No alias Pyridoxal 5'-phosphate synthase-like subunit PDX1.2... 0.03 Orthogroups_2024-Update
Kfl00325_0080 kfl00325_0080_v1.1 (q9at63|pdx1_ginbi : 466.0) Pyridoxin biosynthesis... 0.04 Orthogroups_2024-Update
PSME_00011509-RA No alias (q9at63|pdx1_ginbi : 345.0) Pyridoxin biosynthesis... 0.03 Orthogroups_2024-Update
Potri.001G182100 No alias pyridoxine biosynthesis 1.2 0.08 Orthogroups_2024-Update
Pp1s54_52V6 No alias pyridoxine biosynthesis protein 0.02 Orthogroups_2024-Update
Sopen06g033390 No alias SOR/SNZ family 0.02 Orthogroups_2024-Update
evm.model.tig00000254.47 No alias (q9at63|pdx1_ginbi : 396.0) Pyridoxin biosynthesis... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 30 234
No external refs found!