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  5. Pp1s240_88V6

Pp1s240_88V6


Description : nuclear prelamin a recognition factor-like


Gene families : OG_42_0006947 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s240_88V6
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Potri.006G017000 No alias ferredoxin hydrogenases 0.03 Orthogroups_2024-Update
evm.model.tig00000076.99 No alias (at4g16440 : 308.0) Encodes a [FeFe]-hydrogenase-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
CC GO:0061617 MICOS complex IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003149 Fe_hydrogenase_ssu 409 456
IPR004108 Fe_hydrogenase_lsu_C 92 392
No external refs found!