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  5. Pp1s247_51V6

Pp1s247_51V6


Description : translation initiation factor


Gene families : OG_42_0003113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s247_51V6
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Cre02.g078100 No alias eukaryotic translation initiation factor 2 (eIF-2) family protein 0.02 Orthogroups_2024-Update
Glyma.10G225800 No alias eukaryotic translation initiation factor 2 (eIF-2) family protein 0.03 Orthogroups_2024-Update
Glyma.20G166200 No alias eukaryotic translation initiation factor 2 (eIF-2) family protein 0.03 Orthogroups_2024-Update
Kfl00542_0060 kfl00542_0060_v1.... (at1g76810 : 502.0) eukaryotic translation initiation... 0.03 Orthogroups_2024-Update
Mp4g09260.1 No alias Met-tRNA positioning component eIF5B of initiator tRNA... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 869 1077
IPR029459 EFTU-type 1328 1401
IPR023115 TIF_IF2_dom3 1203 1306
IPR004161 EFTu-like_2 1104 1181
No external refs found!