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  5. Pp1s248_61V6

Pp1s248_61V6


Description : 16kda membrane protein


Gene families : OG_42_0005866 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s248_61V6
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
A4A49_03553 No alias photosystem i subunit o 0.16 Orthogroups_2024-Update
A4A49_57000 No alias photosystem i subunit o 0.05 Orthogroups_2024-Update
At1g08380 No alias PSAO [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y5] 0.08 Orthogroups_2024-Update
Bradi5g09530 No alias photosystem I subunit O 0.04 Orthogroups_2024-Update
Brara.F00523.1 No alias component *(PsaO) of PS-I complex 0.15 Orthogroups_2024-Update
Brara.I05310.1 No alias component *(PsaO) of PS-I complex 0.18 Orthogroups_2024-Update
Cre07.g334550 No alias photosystem I subunit O 0.14 Orthogroups_2024-Update
Glyma.11G181100 No alias photosystem I subunit O 0.08 Orthogroups_2024-Update
Glyma.12G092000 No alias photosystem I subunit O 0.04 Orthogroups_2024-Update
HORVU2Hr1G073370.3 No alias component *(PsaO) of PS-I complex 0.03 Orthogroups_2024-Update
Kfl00283_0090 kfl00283_0090_v1.1 (at1g08380 : 131.0) Encodes subunit O of photosystem I.;... 0.16 Orthogroups_2024-Update
LOC_Os04g33830 No alias membrane protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp8g01210.1 No alias component PsaO of PS-I complex 0.07 Orthogroups_2024-Update
PSME_00026585-RA No alias (at4g29040 : 157.0) 26S proteasome AAA-ATPase subunit... 0.03 Orthogroups_2024-Update
Seita.7G092700.1 No alias component *(PsaO) of PS-I complex 0.14 Orthogroups_2024-Update
Sobic.006G073500.1 No alias component *(PsaO) of PS-I complex 0.14 Orthogroups_2024-Update
Solyc06g074200 No alias photosystem I subunit O (AHRD V3.3 *** AT1G08380.1) 0.09 Orthogroups_2024-Update
Sopen06g030620 No alias hypothetical protein 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!