Pp1s258_82V6

Description : er lumen protein retaining

Gene families : OG_42_0002688 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s258_82V6
Cluster	HCCA clusters: Cluster_258

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi4g19070	No alias	endoplasmic reticulum retention defective 2B	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006621	protein retention in ER lumen	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032507	maintenance of protein location in cell	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
MF	GO:0042277	peptide binding	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
MF	GO:0046923	ER retention sequence binding	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000444	MIS12/MIND type complex	IEP	Predicted GO
CC	GO:0000818	nuclear MIS12/MIND complex	IEP	Predicted GO
CC	GO:0000930	gamma-tubulin complex	IEP	Predicted GO
CC	GO:0000931	gamma-tubulin large complex	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Predicted GO
CC	GO:0008274	gamma-tubulin ring complex	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016579	protein deubiquitination	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Predicted GO
BP	GO:0022406	membrane docking	IEP	Predicted GO
BP	GO:0031503	protein-containing complex localization	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
BP	GO:0033566	gamma-tubulin complex localization	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
BP	GO:0034629	cellular protein-containing complex localization	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
CC	GO:0044450	microtubule organizing center part	IEP	Predicted GO
CC	GO:0044454	nuclear chromosome part	IEP	Predicted GO
BP	GO:0048278	vesicle docking	IEP	Predicted GO
BP	GO:0051640	organelle localization	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0070646	protein modification by small protein removal	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Predicted GO
BP	GO:0140029	exocytic process	IEP	Predicted GO
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000133	ER_ret_rcpt	28	171

External Links

No external refs found!

Pp1s258_82V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation