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  5. Pp1s264_36V6

Pp1s264_36V6


Description : F24J5.20; alpha-xylosidase (XYL1) [Arabidopsis thaliana]


Gene families : OG_42_0001131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s264_36V6
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
At1g68560 No alias Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7] 0.02 Orthogroups_2024-Update
At3g45940 No alias Putative alpha-xylosidase 2... 0.03 Orthogroups_2024-Update
Bradi1g32650 No alias Glycosyl hydrolases family 31 protein 0.02 Orthogroups_2024-Update
Brara.G02803.1 No alias 1,6-alpha-xylosidase *(AXYL1/2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
MA_110168g0010 No alias (at1g68560 : 890.0) Encodes a bifunctional... 0.02 Orthogroups_2024-Update
Mp8g10230.1 No alias 1,6-alpha-xylosidase 0.02 Orthogroups_2024-Update
PSME_00028492-RA No alias (at1g68560 : 899.0) Encodes a bifunctional... 0.02 Orthogroups_2024-Update
Potri.010G125800 No alias alpha-xylosidase 1 0.02 Orthogroups_2024-Update
Sopen04g004780 No alias Glycosyl hydrolases family 31 0.02 Orthogroups_2024-Update
Sopen05g005270 No alias Glycosyl hydrolases family 31 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 301 794
IPR031727 Gal_mutarotase_N 68 211
IPR025887 Glyco_hydro_31_N_dom 215 280
No external refs found!