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  5. Pp1s266_21V6

Pp1s266_21V6


Description : TRANSPARENT TESTA 8 protein (Basic helix-loop-helix protein 42) (bHLH42) (AtbHLH042) [Arabidopsis thaliana]


Gene families : OG_42_0001550 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s266_21V6
Cluster HCCA clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Brara.D01137.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.19G155300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Sobic.006G175700.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 191 373
No external refs found!