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Pp1s270_17V6


Description : Phytochrome-interacting factor 4 (Basic helix-loop-helix protein 9) (bHLH9) (AtbHLH009) (Short under red-light 2) [Arabidopsis thaliana]


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s270_17V6
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_32017 No alias transcription factor bhlh79 0.03 Orthogroups_2024-Update
Bradi4g19577 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
LOC_Os08g41320 No alias BHLH transcription factor, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 259 306
No external refs found!