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  5. Pp1s27_263V6

Pp1s27_263V6


Description : photosystem ii 47 kda protein


Gene families : OG_42_0002336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s27_263V6
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
137729 No alias photosystem II reaction center protein B 0.05 Orthogroups_2024-Update
Bradi1g05740 No alias photosystem II reaction center protein B 0.07 Orthogroups_2024-Update
Bradi5g09702 No alias photosystem II reaction center protein B 0.06 Orthogroups_2024-Update
Brara.E02421.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G557236 No alias photosystem II reaction center protein B 0.03 Orthogroups_2024-Update
GRMZM5G808939 No alias photosystem II reaction center protein B 0.03 Orthogroups_2024-Update
LOC_Os10g21310 No alias photosystem II P680 chlorophyll A apoprotein, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00000999-RA No alias (p41624|psbb_pinth : 441.0) Photosystem II P680... 0.06 Orthogroups_2024-Update
PSME_00001743-RA No alias (p41624|psbb_pinth : 223.0) Photosystem II P680... 0.04 Orthogroups_2024-Update
PSME_00047959-RA No alias (p41624|psbb_pinth : 521.0) Photosystem II P680... 0.06 Orthogroups_2024-Update
Seita.J014000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.003G169100.1 No alias component *(PsbB/CP47) of PS-II reaction center complex 0.07 Orthogroups_2024-Update
Sobic.003G172200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc01g007500 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA InterProScan predictions
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009539 photosystem II reaction center IEA InterProScan predictions
BP GO:0009767 photosynthetic electron transport chain IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016168 chlorophyll binding IEA InterProScan predictions
BP GO:0019684 photosynthesis, light reaction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
InterPro domains Description Start Stop
IPR001743 PSII_PsbT 196 223
IPR000932 PS_antenna-like 3 190
No external refs found!