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  5. Pp1s283_53V6

Pp1s283_53V6


Description : 40s ribosomal protein s30


Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s283_53V6
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
227173 No alias Ribosomal protein S30 family protein 0.09 Orthogroups_2024-Update
At2g19750 No alias 40S ribosomal protein S30... 0.06 Orthogroups_2024-Update
At4g29390 No alias 40S ribosomal protein S30... 0.07 Orthogroups_2024-Update
At5g56670 No alias 40S ribosomal protein S30... 0.02 Orthogroups_2024-Update
Bradi1g48060 No alias Ribosomal protein S30 family protein 0.06 Orthogroups_2024-Update
Brara.A00791.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Brara.C01230.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.I04721.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Cre16.g666301 No alias Ribosomal protein S30 family protein 0.25 Orthogroups_2024-Update
GRMZM2G054012 No alias Ribosomal protein S30 family protein 0.07 Orthogroups_2024-Update
HORVU7Hr1G027760.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os06g07580 No alias expressed protein 0.05 Orthogroups_2024-Update
MA_10432727g0010 No alias (at5g56670 : 97.4) Ribosomal protein S30 family protein;... 0.09 Orthogroups_2024-Update
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.05 Orthogroups_2024-Update
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.04 Orthogroups_2024-Update
PSME_00048165-RA No alias no hits & (original description: no original description) 0.17 Orthogroups_2024-Update
Potri.012G086600 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
Potri.014G147200 No alias Ribosomal protein S30 family protein 0.06 Orthogroups_2024-Update
Potri.015G084700 No alias Ribosomal protein S30 family protein 0.1 Orthogroups_2024-Update
Solyc08g076340 No alias 40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA) 0.11 Orthogroups_2024-Update
Solyc12g008700 No alias peroxisomal ABC transporter 1 (AHRD V3.3 --* AT4G39850.4) 0.23 Orthogroups_2024-Update
evm.model.tig00001003.33 No alias no hits & (original description: no original description) 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 59
No external refs found!