Pp1s29_251V6

Description : pattern formation

Gene families : OG_42_0001315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001315_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s29_251V6
Cluster	HCCA clusters: Cluster_258

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g12920	No alias	sec7 domain-containing protein	0.02	Orthogroups_2024-Update
Bradi1g74210	No alias	sec7 domain-containing protein	0.04	Orthogroups_2024-Update
Glyma.11G221800	No alias	sec7 domain-containing protein	0.03	Orthogroups_2024-Update
Glyma.18G035800	No alias	sec7 domain-containing protein	0.02	Orthogroups_2024-Update
HORVU3Hr1G017750.11	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(GBF)	0.02	Orthogroups_2024-Update
Kfl00216_0140	kfl00216_0140_v1.1	(at1g13980 : 1073.0) Encodes a GDP/GTP exchange factor...	0.02	Orthogroups_2024-Update
MA_10434215g0010	No alias	(at1g13980 : 2061.0) Encodes a GDP/GTP exchange factor...	0.04	Orthogroups_2024-Update
PSME_00031865-RA	No alias	(at3g60860 : 551.0) SEC7-like guanine nucleotide...	0.03	Orthogroups_2024-Update
PSME_00034438-RA	No alias	(at1g13980 : 2105.0) Encodes a GDP/GTP exchange factor...	0.02	Orthogroups_2024-Update
Potri.017G078800	No alias	sec7 domain-containing protein	0.03	Orthogroups_2024-Update
Pp1s12_339V6	No alias	pattern formation	0.03	Orthogroups_2024-Update
Seita.9G326800.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(GBF)	0.02	Orthogroups_2024-Update
Solyc02g088290	No alias	Pattern formation protein EMB30 (AHRD V3.3 *** A0A0B2PDV3_GLYSO)	0.03	Orthogroups_2024-Update
Sopen03g019250	No alias	Sec7 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0032012	regulation of ARF protein signal transduction	IEA	InterProScan predictions
BP	GO:0046578	regulation of Ras protein signal transduction	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051056	regulation of small GTPase mediated signal transduction	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006270	DNA replication initiation	IEP	Predicted GO
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
BP	GO:0046486	glycerolipid metabolic process	IEP	Predicted GO
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0070569	uridylyltransferase activity	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032691	Sec7_N	329	487
IPR000904	Sec7_dom	578	759

External Links

No external refs found!

Pp1s29_251V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation