Pp1s302_25V6

Description : ribosomal protein l19

Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s302_25V6
Cluster	HCCA clusters: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
271656	No alias	Ribosomal protein L19e family protein	0.06	Orthogroups_2024-Update
A4A49_58465	No alias	60s ribosomal protein l19-2	0.06	Orthogroups_2024-Update
Bradi1g17920	No alias	Ribosomal protein L19e family protein	0.07	Orthogroups_2024-Update
Brara.I00133.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Brara.I05560.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Brara.J00128.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Cre02.g075700	No alias	Ribosomal protein L19e family protein	0.07	Orthogroups_2024-Update
GRMZM2G116135	No alias	Ribosomal protein L19e family protein	0.03	Orthogroups_2024-Update
Glyma.02G016000	No alias	Ribosomal protein L19e family protein	0.06	Orthogroups_2024-Update
Glyma.19G213200	No alias	Ribosomal protein L19e family protein	0.04	Orthogroups_2024-Update
HORVU2Hr1G018700.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
HORVU4Hr1G049670.2	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Kfl00915_0030	kfl00915_0030_v1.1	(at1g02780 : 290.0) embryo defective 2386 (emb2386);...	0.05	Orthogroups_2024-Update
MA_102433g0010	No alias	(at1g02780 : 271.0) embryo defective 2386 (emb2386);...	0.03	Orthogroups_2024-Update
MA_1839g0010	No alias	(at1g02780 : 287.0) embryo defective 2386 (emb2386);...	0.03	Orthogroups_2024-Update
MA_22977g0010	No alias	(at1g02780 : 282.0) embryo defective 2386 (emb2386);...	0.04	Orthogroups_2024-Update
Mp7g09050.1	No alias	component RPL19 of LSU proteome component	0.04	Orthogroups_2024-Update
PSME_00044681-RA	No alias	(at3g16780 : 285.0) Ribosomal protein L19e family...	0.03	Orthogroups_2024-Update
Pp1s121_144V6	No alias	60s ribosomal protein	0.07	Orthogroups_2024-Update
Pp1s235_118V6	No alias	60s ribosomal protein	0.06	Orthogroups_2024-Update
Pp1s3_375V6	No alias	60s ribosomal protein l19-3	0.07	Orthogroups_2024-Update
Pp1s50_102V6	No alias	60s ribosomal protein l19-3	0.06	Orthogroups_2024-Update
Seita.4G043900.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Sobic.003G196800.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.004G045300.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.010G069400.1	No alias	component *(eL19) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Solyc06g009210	No alias	Ribosomal protein L19 (AHRD V3.3 *** K4C3V1_SOLLC)	0.06	Orthogroups_2024-Update
Solyc09g075430	No alias	Ribosomal protein L19 (AHRD V3.3 *** K4CVC0_SOLLC)	0.03	Orthogroups_2024-Update
Sopen06g003980	No alias	Ribosomal protein L19e	0.03	Orthogroups_2024-Update
Sopen09g030210	No alias	Ribosomal protein L19e	0.02	Orthogroups_2024-Update
evm.model.contig_735.3	No alias	(at3g16780 : 205.0) Ribosomal protein L19e family...	0.02	Orthogroups_2024-Update
evm.model.tig00021181.1	No alias	(at1g02780 : 206.0) embryo defective 2386 (emb2386);...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004140	dephospho-CoA kinase activity	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
CC	GO:0005741	mitochondrial outer membrane	IEP	Predicted GO
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Predicted GO
BP	GO:0006405	RNA export from nucleus	IEP	Predicted GO
BP	GO:0006406	mRNA export from nucleus	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Predicted GO
BP	GO:0015031	protein transport	IEP	Predicted GO
BP	GO:0015833	peptide transport	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
CC	GO:0019867	outer membrane	IEP	Predicted GO
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predicted GO
CC	GO:0031090	organelle membrane	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
CC	GO:0031968	organelle outer membrane	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
BP	GO:0042886	amide transport	IEP	Predicted GO
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
BP	GO:0044093	positive regulation of molecular function	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
BP	GO:0050657	nucleic acid transport	IEP	Predicted GO
BP	GO:0050658	RNA transport	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051028	mRNA transport	IEP	Predicted GO
BP	GO:0051168	nuclear export	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051236	establishment of RNA localization	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0070585	protein localization to mitochondrion	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO
BP	GO:0071806	protein transmembrane transport	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predicted GO
CC	GO:0098588	bounding membrane of organelle	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098805	whole membrane	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000196	Ribosomal_L19/L19e	4	146

External Links

No external refs found!

Pp1s302_25V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation