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Description : T22P22.120; expressed protein [Arabidopsis thaliana]
Gene families : OG_42_0000408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000408_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s30_164V6 | |
| Cluster | HCCA clusters: Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.F02770.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g52120 | No alias | DNA binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Potri.004G228100 | No alias | Core-2/I-branching... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g045560 | No alias | Core-2/I-Branching enzyme | 0.02 | Orthogroups_2024-Update | |
| Sopen05g004840 | No alias | Core-2/I-Branching enzyme | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEA | InterProScan predictions |
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Predicted GO |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
| CC | GO:0070449 | elongin complex | IEP | Predicted GO |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003406 | Glyco_trans_14 | 122 | 348 |
| No external refs found! |