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  5. Pp1s317_55V6

Pp1s317_55V6


Description : atmyb16 (myb domain protein 16) dna binding transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s317_55V6
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
109587 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
At2g36890 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At3g30210 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5] 0.02 Orthogroups_2024-Update
At4g34990 No alias Transcription factor MYB32... 0.02 Orthogroups_2024-Update
At5g12870 No alias Transcription factor MYB46... 0.02 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
Bradi3g36660 No alias myb domain protein 106 0.04 Orthogroups_2024-Update
GRMZM2G104551 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.18G095600 No alias myb domain protein 101 0.03 Orthogroups_2024-Update
HORVU5Hr1G098540.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os08g33940 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00010776-RA No alias (at1g22640 : 177.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00042627-RA No alias (at3g61250 : 265.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
Pp1s66_200V6 No alias gamyb1 gene for gibberellin MYB transcription factor... 0.02 Orthogroups_2024-Update
Seita.7G030000.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G196100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sopen08g027720 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000940 condensed chromosome outer kinetochore IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005874 microtubule IEP Predicted GO
CC GO:0005876 spindle microtubule IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
CC GO:0099080 supramolecular complex IEP Predicted GO
CC GO:0099081 supramolecular polymer IEP Predicted GO
CC GO:0099512 supramolecular fiber IEP Predicted GO
CC GO:0099513 polymeric cytoskeletal fiber IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!