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  5. Pp1s318_70V6

Pp1s318_70V6


Description : contains ESTs C98722(E3004),C98723(E3004) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000703 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s318_70V6
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
441151 No alias soybean gene regulated by cold-2 0.02 Orthogroups_2024-Update
A4A49_05338 No alias hypothetical protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G058300.1 No alias ER-anchored membrane contact site protein *(SRC2) 0.02 Orthogroups_2024-Update
HORVU2Hr1G012200.1 No alias ER-anchored membrane contact site protein *(SRC2) 0.03 Orthogroups_2024-Update
LOC_Os01g70790 No alias SRC2 protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G209800 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Orthogroups_2024-Update
Potri.013G018500 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s75_103V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.3G038200.1 No alias ER-anchored membrane contact site protein *(SRC2) 0.02 Orthogroups_2024-Update
Sobic.006G010500.2 No alias ER-anchored membrane contact site protein *(SRC2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 6 100
No external refs found!