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  5. Pp1s334_17V6

Pp1s334_17V6


Description : photosystem i reaction center subunit iv a


Gene families : OG_42_0005311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s334_17V6
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_36117 No alias photosystem i reaction center subunit iv b, chloroplastic 0.06 Orthogroups_2024-Update
At4g28750 No alias Photosystem I reaction center subunit IV A,... 0.13 Orthogroups_2024-Update
Brara.A00845.1 No alias component *(PsaE) of PS-I complex 0.15 Orthogroups_2024-Update
Brara.H01465.1 No alias component *(PsaE) of PS-I complex 0.2 Orthogroups_2024-Update
Cre10.g420350 No alias photosystem I subunit E-2 0.14 Orthogroups_2024-Update
Glyma.10G042000 No alias photosystem I subunit E-2 0.18 Orthogroups_2024-Update
Glyma.10G042100 No alias photosystem I subunit E-2 0.11 Orthogroups_2024-Update
Glyma.13G129400 No alias photosystem I subunit E-2 0.2 Orthogroups_2024-Update
Glyma.13G129500 No alias photosystem I subunit E-2 0.12 Orthogroups_2024-Update
HORVU5Hr1G113900.2 No alias component *(PsaE) of PS-I complex 0.11 Orthogroups_2024-Update
Kfl00057_0180 kfl00057_0180_v1.1 (p12352|psae_chlre : 88.2) Photosystem I reaction center... 0.18 Orthogroups_2024-Update
LOC_Os07g25430 No alias photosystem I reaction center subunit IV A, chloroplast... 0.02 Orthogroups_2024-Update
Mp1g24020.1 No alias component PsaE of PS-I complex 0.16 Orthogroups_2024-Update
PSME_00050490-RA No alias (q41228|psaea_nicsy : 110.0) Photosystem I reaction... 0.09 Orthogroups_2024-Update
Potri.002G253800 No alias photosystem I subunit E-2 0.02 Orthogroups_2024-Update
Seita.2G117000.1 No alias component *(PsaE) of PS-I complex 0.24 Orthogroups_2024-Update
Sobic.002G119500.3 No alias component *(PsaE) of PS-I complex 0.23 Orthogroups_2024-Update
Solyc06g083680 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Solyc09g063130 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Sopen06g035100 No alias Photosystem I reaction centre subunit IV / PsaE 0.07 Orthogroups_2024-Update
Sopen09g025300 No alias Photosystem I reaction centre subunit IV / PsaE 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003375 PSI_PsaE 74 132
No external refs found!