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  5. Pp1s335_63V6

Pp1s335_63V6


Description : F9E10.9; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0001751 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001751_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s335_63V6
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Sobic.009G147700.1 No alias associated component *(AFR) of histone deacetylase machineries 0.04 Orthogroups_2024-Update
evm.model.contig_4406.4 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.tig00000076.103 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 186 239
No external refs found!