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  5. Pp1s33_217V6

Pp1s33_217V6


Description : contains ESTs C26748(C12959),D22147(C10416),AU092076(C10416) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0001033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s33_217V6
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
At1g72960 No alias Protein ROOT HAIR DEFECTIVE 3 homolog 1... 0.04 Orthogroups_2024-Update
Bradi4g15200 No alias Root hair defective 3 GTP-binding protein (RHD3) 0.02 Orthogroups_2024-Update
PSME_00011517-RA No alias (at3g13870 : 1001.0) required for regulated cell... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR008803 RHD3/Sey1 45 774
No external refs found!