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  5. Pp1s33_251V6

Pp1s33_251V6


Description : expa5 gene for putative alpha expansin protein family EXPA5


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s33_251V6
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
174522 No alias expansin A8 0.05 Orthogroups_2024-Update
409954 No alias expansin A8 0.03 Orthogroups_2024-Update
419575 No alias expansin A16 0.03 Orthogroups_2024-Update
A4A49_12237 No alias expansin-a15 0.02 Orthogroups_2024-Update
Brara.A03836.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.B03141.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.D00393.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.D02404.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.G01411.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
GRMZM2G339122 No alias expansin A1 0.02 Orthogroups_2024-Update
Glyma.06G143300 No alias expansin A8 0.02 Orthogroups_2024-Update
Glyma.11G160000 No alias expansin A8 0.03 Orthogroups_2024-Update
HORVU0Hr1G032890.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_100868g0010 No alias (at2g40610 : 292.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_37884g0010 No alias (q40636|expa2_orysa : 400.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
Mp4g06560.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Mp5g01930.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00006590-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00037641-RA No alias (q852a1|expa7_orysa : 440.0) Expansin-A7 precursor... 0.02 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 67 149
IPR007117 Expansin_CBD 160 239
No external refs found!