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  5. Pp1s33_259V6

Pp1s33_259V6


Description : alpha expansin xpa5


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s33_259V6
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
231226 No alias expansin A9 0.03 Orthogroups_2024-Update
409954 No alias expansin A8 0.03 Orthogroups_2024-Update
91129 No alias expansin A15 0.03 Orthogroups_2024-Update
At3g03220 No alias Expansin-A13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P0] 0.02 Orthogroups_2024-Update
At5g39280 No alias Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79] 0.02 Orthogroups_2024-Update
MA_10425823g0010 No alias (q852a1|expa7_orysa : 372.0) Expansin-A7 precursor... 0.02 Orthogroups_2024-Update
MA_36587g0010 No alias (at2g40610 : 414.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_37884g0010 No alias (q40636|expa2_orysa : 400.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.04 Orthogroups_2024-Update
Mp2g18600.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00037641-RA No alias (q852a1|expa7_orysa : 440.0) Expansin-A7 precursor... 0.03 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.02 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.05 Orthogroups_2024-Update
Potri.016G135200 No alias expansin A8 0.02 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.04 Orthogroups_2024-Update
Seita.1G008200.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Seita.6G086300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.001G314600.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.007G166500.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.010G006200.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 74 156
IPR007117 Expansin_CBD 167 247
No external refs found!