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  5. Pp1s340_22V6

Pp1s340_22V6


Description : T12P18.20; brix domain-containing protein [Arabidopsis thaliana]


Gene families : OG_42_0005915 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s340_22V6
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G139900 No alias Ribosomal RNA processing Brix domain protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G071450.1 No alias SSU processome assembly factor *(IMP4) 0.04 Orthogroups_2024-Update
Seita.6G058500.1 No alias SSU processome assembly factor *(IMP4) 0.04 Orthogroups_2024-Update
Sobic.010G247400.1 No alias SSU processome assembly factor *(IMP4) 0.03 Orthogroups_2024-Update
Sopen01g003240 No alias Brix domain 0.03 Orthogroups_2024-Update
evm.model.contig_2299.1 No alias (at1g63780 : 325.0) Small nucleolar ribonucleoprotein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007109 Brix 90 260
No external refs found!