Pp1s341_43V6


Description : f-box family protein


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s341_43V6
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
A4A49_10722 No alias dof zinc finger protein dof2.4 0.03 Orthogroups_2024-Update
Brara.D02286.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Glyma.10G173700 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.16G022900 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU2Hr1G119160.3 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
PSME_00040668-RA No alias (at5g02460 : 137.0) Dof-type zinc finger DNA-binding... 0.03 Orthogroups_2024-Update
Potri.001G238400 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Solyc10g009360 No alias Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 31 84
No external refs found!