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Pp1s341_67V6


Description : dna repair and recombination protein


Gene families : OG_42_0003856 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s341_67V6
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G038300 No alias chromatin remodeling 8 0.02 Orthogroups_2024-Update
HORVU6Hr1G078680.2 No alias chromatin remodeling factor *(RAD54) 0.03 Orthogroups_2024-Update
Potri.004G141500 No alias homolog of RAD54 0.03 Orthogroups_2024-Update
Sobic.004G307900.1 No alias chromatin remodeling factor *(RAD54) 0.03 Orthogroups_2024-Update
Sopen04g025310 No alias SNF2 family N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006012 galactose metabolic process IEP Predicted GO
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 558 665
IPR000330 SNF2_N 217 510
No external refs found!