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  5. Pp1s34_227V6

Pp1s34_227V6


Description : F12A4.2; basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana]


Gene families : OG_42_0000702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s34_227V6
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Brara.D02568.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.03 Orthogroups_2024-Update
Brara.F00266.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.03 Orthogroups_2024-Update
Brara.H00576.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.02 Orthogroups_2024-Update
Brara.J00400.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G153454 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G131200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G073240.2 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G050540.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00041383-RA No alias (at1g35460 : 145.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
PSME_00041614-RA No alias (at2g42280 : 145.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Potri.001G017300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G207200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G252900.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.03 Orthogroups_2024-Update
Seita.7G145100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Solyc11g056650 No alias bHLH transcription factor 096 0.02 Orthogroups_2024-Update
Sopen09g036050 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g023410 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 458 503
No external refs found!