Description : histone h2b
Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s34_255V6 | |
Cluster | HCCA clusters: Cluster_100 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_29058 | No alias | histone h2b | 0.03 | Orthogroups_2024-Update | |
At3g45980 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V9F6] | 0.02 | Orthogroups_2024-Update | |
At5g22880 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:Q1H5F7] | 0.02 | Orthogroups_2024-Update | |
Brara.J01445.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
Cre06.g271376 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g273850 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g504550 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre12.g504700 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G058440.4 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G078480.6 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G013680.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
Potri.009G028001 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Sobic.003G200501.1 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predicted GO |
MF | GO:0003839 | gamma-glutamylcyclotransferase activity | IEP | Predicted GO |
MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006749 | glutathione metabolic process | IEP | Predicted GO |
BP | GO:0006751 | glutathione catabolic process | IEP | Predicted GO |
MF | GO:0010181 | FMN binding | IEP | Predicted GO |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
MF | GO:0033218 | amide binding | IEP | Predicted GO |
BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Predicted GO |
BP | GO:0043171 | peptide catabolic process | IEP | Predicted GO |
BP | GO:0044273 | sulfur compound catabolic process | IEP | Predicted GO |
BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
MF | GO:1901567 | fatty acid derivative binding | IEP | Predicted GO |
MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 7 | 112 |
No external refs found! |