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  5. Solyc11g069340

Solyc11g069340


Description : Zinc finger transcription factor 69


Gene families : OG_42_0005895 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g069340
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_09554 No alias zinc finger ccch domain-containing protein 24 0.04 Orthogroups_2024-Update
Sobic.006G002800.1 No alias tRNA uridine-methyltransferase *(TRM2) & EC_2.1... 0.02 Orthogroups_2024-Update
Sopen11g028060 No alias tRNA (Uracil-5-)-methyltransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0008173 RNA methyltransferase activity IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025714 Methyltranfer_dom 627 685
IPR010280 U5_MeTrfase_fam 806 855
IPR000571 Znf_CCCH 109 136
No external refs found!