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  5. Pp1s359_34V6

Pp1s359_34V6


Description : contains ESTs AU162304(E60027),AU030624(E60027) similar to SCARECROW gene regulator [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s359_34V6
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G163427 No alias GRAS family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 387 755
No external refs found!