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  5. Solyc11g069930

Solyc11g069930


Description : Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH)


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g069930
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G048301 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Orthogroups_2024-Update
Glyma.19G113450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
HORVU6Hr1G094980.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G117690.6 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g47800 No alias disease resistance protein RGA3, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G025400 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T116200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.8G244000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.J024800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g006740 No alias Disease resistance protein (AHRD V3.3 *-* Q1RU52_MEDTR) 0.04 Orthogroups_2024-Update
Solyc11g071390 No alias LOW QUALITY:I2C7 0.03 Orthogroups_2024-Update
Sopen11g028600 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!