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  5. Pp1s36_43V6

Pp1s36_43V6


Description : myb-like protein


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s36_43V6
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
A4A49_24949 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
A4A49_29942 No alias transcription factor myb44 0.02 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.02 Orthogroups_2024-Update
Bradi4g08220 No alias myb domain protein r1 0.02 Orthogroups_2024-Update
Brara.A00155.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01385.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Glyma.03G073764 No alias myb domain protein 118 0.02 Orthogroups_2024-Update
Glyma.14G086500 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
MA_120049g0010 No alias (at3g50060 : 201.0) Encodes a member of the R2R3... 0.02 Orthogroups_2024-Update
Potri.007G134500 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
Seita.3G217600.1 No alias R1R2R3-MYB transcription factor 0.02 Orthogroups_2024-Update
evm.model.contig_3578.1 No alias (at3g09370 : 147.0) putative c-myb-like transcription... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 84 130
IPR001005 SANT/Myb 136 179
IPR001005 SANT/Myb 32 78
No external refs found!