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  5. Pp1s372_10V6

Pp1s372_10V6


Description : 40s ribosomal protein


Gene families : OG_42_0002517 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s372_10V6
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
271040 No alias Ribosomal protein S21e 0.18 Orthogroups_2024-Update
At3g53890 No alias 40S ribosomal protein S21-1... 0.03 Orthogroups_2024-Update
At5g27700 No alias 40S ribosomal protein S21... 0.06 Orthogroups_2024-Update
Bradi1g62691 No alias Ribosomal protein S21e 0.32 Orthogroups_2024-Update
Brara.D00506.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.F02849.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.21 Orthogroups_2024-Update
Brara.I03670.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.33 Orthogroups_2024-Update
Cre03.g203450 No alias Ribosomal protein S21e 0.06 Orthogroups_2024-Update
GRMZM2G125300 No alias Ribosomal protein S21e 0.04 Orthogroups_2024-Update
GRMZM2G134109 No alias Ribosomal protein S21e 0.14 Orthogroups_2024-Update
Glyma.09G045000 No alias Ribosomal protein S21e 0.12 Orthogroups_2024-Update
Glyma.15G147700 No alias Ribosomal protein S21e 0.15 Orthogroups_2024-Update
Kfl00268_0170 kfl00268_0170_v1.1 (p35687|rs21_orysa : 140.0) 40S ribosomal protein S21 -... 0.08 Orthogroups_2024-Update
MA_21647g0010 No alias (at5g27700 : 150.0) Ribosomal protein S21e ; FUNCTIONS... 0.11 Orthogroups_2024-Update
MA_73657g0010 No alias (at5g27700 : 114.0) Ribosomal protein S21e ; FUNCTIONS... 0.05 Orthogroups_2024-Update
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.07 Orthogroups_2024-Update
PSME_00047574-RA No alias (at5g27700 : 115.0) Ribosomal protein S21e ; FUNCTIONS... 0.11 Orthogroups_2024-Update
Potri.005G026000 No alias Ribosomal protein S21e 0.16 Orthogroups_2024-Update
Potri.013G017600 No alias Ribosomal protein S21e 0.1 Orthogroups_2024-Update
Seita.9G131800.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Seita.9G407100.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.001G130301.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sobic.001G374700.2 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.3 Orthogroups_2024-Update
Solyc01g066840 No alias 40S ribosomal protein S21 (AHRD V3.3 *** A0A0V0GU27_SOLCH) 0.28 Orthogroups_2024-Update
Solyc04g074910 No alias 40S ribosomal protein S21 (AHRD V3.3 *** M0ZPV5_SOLTU) 0.04 Orthogroups_2024-Update
Sopen01g028440 No alias Ribosomal protein S21e 0.14 Orthogroups_2024-Update
Sopen04g029860 No alias Ribosomal protein S21e 0.02 Orthogroups_2024-Update
evm.model.contig_2342.3 No alias (p35687|rs21_orysa : 96.3) 40S ribosomal protein S21 -... 0.33 Orthogroups_2024-Update
evm.model.tig00020780.14 No alias (at5g27700 : 110.0) Ribosomal protein S21e ; FUNCTIONS... 0.18 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!