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  5. Pp1s376_46V6

Pp1s376_46V6


Description : lipid binding


Gene families : OG_42_0000357 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s376_46V6
Cluster HCCA clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Brara.B03643.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G212100 No alias ENHANCED DISEASE RESISTANCE 2 0.02 Orthogroups_2024-Update
LOC_Os08g34060 No alias DUF1336 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g31770 No alias START domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.010G223400 No alias Pleckstrin homology (PH) and lipid-binding START... 0.04 Orthogroups_2024-Update
Seita.4G012700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc07g005000 No alias Pleckstrin-like (PH) and lipid-binding START domain... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009769 EDR2_C 568 791
IPR002913 START_lipid-bd_dom 257 400
No external refs found!