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  5. Pp1s37_226V6

Pp1s37_226V6


Description : F18A5.30; myb family transcription factor [Arabidopsis thaliana]


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s37_226V6
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
A4A49_12162 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
A4A49_36129 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
At1g69580 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT1G69580] 0.02 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
At4g13640 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT4G13640] 0.02 Orthogroups_2024-Update
Bradi1g32370 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g21407 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Bradi2g21880 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g52500 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00862.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.G02892.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Brara.J01739.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G196600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G043000 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G167500 No alias phosphate starvation response 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G070420.7 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00262_0120 kfl00262_0120_v1.... (at2g01060 : 94.0) myb-like HTH transcriptional... 0.02 Orthogroups_2024-Update
LOC_Os03g20900 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g40960 No alias Myb transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g45410 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33750 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10266929g0010 No alias (at2g01060 : 139.0) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
Potri.003G100100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G023600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G048000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G117000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.019G020900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s47_90V6 No alias at3g24120 muj8_3 0.06 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Sobic.002G422000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G058700.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.03 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update
Sopen12g008150 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 141 193
IPR001005 SANT/Myb 43 93
No external refs found!