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  5. Pp1s39_424V6

Pp1s39_424V6


Description : 60s acidic ribosomal protein


Gene families : OG_42_0002448 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s39_424V6
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Brara.A03571.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.C02046.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.C03284.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.E03102.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
GRMZM2G179976 No alias Ribosomal protein L10 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0042254 ribosome biogenesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 8 108
No external refs found!