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  5. Pp1s3_241V6

Pp1s3_241V6


Description : global transcription factor group


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s3_241V6
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Cre10.g455500 No alias global transcription factor group E3 0.01 Orthogroups_2024-Update
Glyma.13G222500 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
HORVU6Hr1G054560.6 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
evm.model.contig_3458.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 139 223
IPR027353 NET_dom 303 364
No external refs found!