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  5. Pp1s42_208V6

Pp1s42_208V6


Description : T22H22.19; thylakoid lumen 18.3 kDa protein [Arabidopsis thaliana]


Gene families : OG_42_0006589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s42_208V6
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
At1g54780 No alias TLP18.3 [Source:UniProtKB/TrEMBL;Acc:A0A178WHT4] 0.08 Orthogroups_2024-Update
Bradi2g25910 No alias thylakoid lumen 18.3 kDa protein 0.06 Orthogroups_2024-Update
Cre03.g182150 No alias thylakoid lumen 18.3 kDa protein 0.08 Orthogroups_2024-Update
Kfl00736_0090 kfl00736_0090_v1.1 (at1g54780 : 253.0) Encodes a thylakoid lumen protein... 0.04 Orthogroups_2024-Update
MA_10433010g0010 No alias (at1g54780 : 325.0) Encodes a thylakoid lumen protein... 0.05 Orthogroups_2024-Update
PSME_00038945-RA No alias (at1g54780 : 192.0) Encodes a thylakoid lumen protein... 0.06 Orthogroups_2024-Update
Potri.013G026400 No alias thylakoid lumen 18.3 kDa protein 0.03 Orthogroups_2024-Update
Sobic.009G130700.1 No alias protein involved in PS-II assembly *(Psb32) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007621 TPM_dom 112 235
No external refs found!