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  5. Pp1s442_14V6

Pp1s442_14V6


Description : MEB5.8; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s442_14V6
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
A4A49_10090 No alias protein tify 10a 0.04 Orthogroups_2024-Update
A4A49_42021 No alias protein tify 10a 0.03 Orthogroups_2024-Update
Bradi1g21490 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Bradi2g05850 No alias TIFY domain/Divergent CCT motif family protein 0.02 Orthogroups_2024-Update
Bradi3g10820 No alias jasmonate-zim-domain protein 1 0.04 Orthogroups_2024-Update
Brara.B02027.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G02251.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Brara.I04752.1 No alias TIFY-type transcription factor 0.01 Orthogroups_2024-Update
Brara.I04830.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G089736 No alias TIFY domain/Divergent CCT motif family protein 0.02 Orthogroups_2024-Update
GRMZM2G101769 No alias TIFY domain/Divergent CCT motif family protein 0.02 Orthogroups_2024-Update
Glyma.07G041400 No alias jasmonate-zim-domain protein 6 0.02 Orthogroups_2024-Update
LOC_Os10g25290 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426545g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10426545g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_137163g0010 No alias (at1g70700 : 84.0) JAZ9 is a protein presumed to be... 0.04 Orthogroups_2024-Update
PSME_00024545-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00032766-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00044783-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00045652-RA No alias (at1g70700 : 80.1) JAZ9 is a protein presumed to be... 0.04 Orthogroups_2024-Update
PSME_00046059-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.9G252500.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 241 273
IPR018467 CCT_CS 350 368
No external refs found!