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Description : 40s ribosomal protein
Gene families : OG_42_0001226 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001226_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s46_183V6 | |
| Cluster | HCCA clusters: Cluster_87 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_00086 | No alias | 40s ribosomal protein s8 | 0.04 | Orthogroups_2024-Update | |
| A4A49_00202 | No alias | 40s ribosomal protein s8 | 0.04 | Orthogroups_2024-Update | |
| A4A49_17431 | No alias | 40s ribosomal protein s8 | 0.05 | Orthogroups_2024-Update | |
| A4A49_62566 | No alias | 40s ribosomal protein s8 | 0.02 | Orthogroups_2024-Update | |
| Bradi1g51357 | No alias | Ribosomal protein S8e family protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g43560 | No alias | Ribosomal protein S8e family protein | 0.03 | Orthogroups_2024-Update | |
| Brara.B00878.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Brara.C00929.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
| Brara.J01583.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Cre06.g272800 | No alias | Ribosomal protein S8e family protein | 0.05 | Orthogroups_2024-Update | |
| GRMZM2G336875 | No alias | Ribosomal protein S8e family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.16G087700 | No alias | Ribosomal protein S8e family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G157300 | No alias | Ribosomal protein S8e family protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G067370.5 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g28180 | No alias | ribosomal protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00001605-RA | No alias | (q08069|rs8_maize : 279.0) 40S ribosomal protein S8 -... | 0.02 | Orthogroups_2024-Update | |
| Pp1s227_85V6 | No alias | 40s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G314000.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Seita.7G057900.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G244800.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G035900.1 | No alias | component *(eS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Solyc06g007570 | No alias | 40S ribosomal protein S8 (AHRD V3.3 *** K4C3D8_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| Solyc07g065170 | No alias | 40S ribosomal protein S8 (AHRD V3.3 *** K4CHJ6_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc09g057650 | No alias | 40S ribosomal protein S8 (AHRD V3.3 *** K4CTF6_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Sopen06g002470 | No alias | Ribosomal protein S8e | 0.03 | Orthogroups_2024-Update | |
| Sopen06g034570 | No alias | Ribosomal protein S8e | 0.02 | Orthogroups_2024-Update | |
| Sopen07g033390 | No alias | Ribosomal protein S8e | 0.04 | Orthogroups_2024-Update | |
| Sopen09g021090 | No alias | Ribosomal protein S8e | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_4462.6 | No alias | (q08069|rs8_maize : 255.0) 40S ribosomal protein S8 -... | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00020610.79 | No alias | (p49199|rs8_orysa : 269.0) 40S ribosomal protein S8 -... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
| BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
| BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| MF | GO:0008061 | chitin binding | IEP | Predicted GO |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 1 | 194 |
| No external refs found! |