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  5. Solyc01g099940

Solyc01g099940


Description : Pectinesterase (AHRD V3.3 *** K4B128_SOLLC)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g099940
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.03 Orthogroups_2024-Update
A4A49_38545 No alias pectinesterase 2 0.02 Orthogroups_2024-Update
At5g51490 No alias Probable pectinesterase/pectinesterase inhibitor 59... 0.03 Orthogroups_2024-Update
Brara.A02443.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.08 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Glyma.08G044000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.12G004400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
HORVU5Hr1G010860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434031g0010 No alias (o04886|pme1_citsi : 471.0) Pectinesterase-1 precursor... 0.02 Orthogroups_2024-Update
MA_10434624g0020 No alias (at1g53830 : 387.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
MA_354248g0010 No alias (at3g49220 : 511.0) Plant invertase/pectin... 0.04 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.006G134700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 255 413
IPR006501 Pectinesterase_inhib_dom 49 197
No external refs found!