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  5. Pp1s47_90V6

Pp1s47_90V6


Description : at3g24120 muj8_3


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s47_90V6
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
A4A49_06988 No alias putative myb family transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G454449 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G014800 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G250000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G106800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G171100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G207300 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os08g33750 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00036264-RA No alias (at5g29000 : 213.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.002G056700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s37_226V6 No alias F18A5.30; myb family transcription factor [Arabidopsis thaliana] 0.06 Orthogroups_2024-Update
Seita.1G021500.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Seita.2G436900.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0030173 integral component of Golgi membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031228 intrinsic component of Golgi membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 48 96
IPR025756 Myb_CC_LHEQLE 144 190
No external refs found!