Description : RNA polymerase II transcription mediator (AHRD V3.3 *** A0A097PP20_SOLLC)
Gene families : OG_42_0006786 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006786_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc12g006650 | |
Cluster | HCCA clusters: Cluster_243 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sobic.003G104000.1 | No alias | component *(MED17) of head module of MEDIATOR... | 0.04 | Orthogroups_2024-Update | |
Sopen12g002600 | No alias | Subunit 17 of Mediator complex | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEA | InterProScan predictions |
CC | GO:0016592 | mediator complex | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
MF | GO:0008131 | primary amine oxidase activity | IEP | Predicted GO |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Predicted GO |
MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019313 | Mediator_Med17 | 115 | 350 |
No external refs found! |