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  5. Pp1s49_256V6

Pp1s49_256V6


Description : 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) [Oryza sativa]


Gene families : OG_42_0002955 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s49_256V6
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Cre14.g625400 No alias regulatory particle triple-A 1A 0.04 Orthogroups_2024-Update
HORVU6Hr1G083150.1 No alias regulatory component *(RPT1) of 26S proteasome 0.05 Orthogroups_2024-Update
Seita.1G343700.1 No alias regulatory component *(RPT1) of 26S proteasome 0.03 Orthogroups_2024-Update
Seita.4G042600.1 No alias regulatory component *(RPT1) of 26S proteasome 0.02 Orthogroups_2024-Update
evm.model.contig_3817.1 No alias (q9fxt9|prs7_orysa : 692.0) 26S protease regulatory... 0.02 Orthogroups_2024-Update
evm.model.tig00021464.16 No alias (at1g53750 : 664.0) 26S proteasome AAA-ATPase subunit... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 204 336
No external refs found!