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  5. Pp1s4_178V6

Pp1s4_178V6


Description : F24J13.17; 60S ribosomal protein L27A (RPL27aC) [KO:K02900] [Arabidopsis thaliana]


Gene families : OG_42_0002371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_178V6
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
165371 No alias Ribosomal protein L18e/L15 superfamily protein 0.08 Orthogroups_2024-Update
A4A49_03476 No alias 60s ribosomal protein l27a-3 0.11 Orthogroups_2024-Update
Bradi1g21630 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g60160 No alias Ribosomal protein L18e/L15 superfamily protein 0.02 Orthogroups_2024-Update
Brara.B01921.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G00984.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.G02983.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.H02216.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.I03248.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre02.g115200 No alias Ribosomal protein L18e/L15 superfamily protein 0.13 Orthogroups_2024-Update
Glyma.01G026100 No alias Ribosomal protein L18e/L15 superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G038700 No alias Ribosomal protein L18e/L15 superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G187500 No alias Ribosomal protein L18e/L15 superfamily protein 0.07 Orthogroups_2024-Update
Glyma.17G085400 No alias Ribosomal protein L18e/L15 superfamily protein 0.14 Orthogroups_2024-Update
Kfl00032_0090 kfl00032_0090_v1.1 (at1g70600 : 226.0) Ribosomal protein L18e/L15... 0.06 Orthogroups_2024-Update
LOC_Os03g29460 No alias 60S ribosomal protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_102140g0020 No alias (at1g70600 : 267.0) Ribosomal protein L18e/L15... 0.02 Orthogroups_2024-Update
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.03 Orthogroups_2024-Update
Mp5g00120.1 No alias component RPL27a of LSU proteome component 0.08 Orthogroups_2024-Update
Potri.016G069000 No alias Ribosomal protein L18e/L15 superfamily protein 0.05 Orthogroups_2024-Update
Pp1s154_116V6 No alias 60S ribosomal protein L27a-3 [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G387500.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.002G372400.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.21 Orthogroups_2024-Update
Sobic.004G055100.1 No alias component *(uL15) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Solyc03g112360 No alias 60S ribosomal protein L27A (AHRD V3.3 *** B6VC54_VERFO) 0.18 Orthogroups_2024-Update
Solyc06g071720 No alias 60S ribosomal protein L27A (AHRD V3.3 *** B6VC54_VERFO) 0.02 Orthogroups_2024-Update
Sopen03g031460 No alias Ribosomal protein L18e/L15 0.16 Orthogroups_2024-Update
Sopen06g028020 No alias Ribosomal protein L18e/L15 0.02 Orthogroups_2024-Update
evm.model.contig_4432.8 No alias (at1g70600 : 218.0) Ribosomal protein L18e/L15... 0.19 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 143
No external refs found!