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  5. Pp1s4_277V6

Pp1s4_277V6


Description : 26s proteasome subunit 4


Gene families : OG_42_0003207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_277V6
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
A4A49_35005 No alias 26s proteasome regulatory subunit 4-like a 0.02 Orthogroups_2024-Update
At4g29040 No alias RPT2a [Source:UniProtKB/TrEMBL;Acc:A0A178V3V3] 0.02 Orthogroups_2024-Update
Cre07.g329700 No alias regulatory particle AAA-ATPase 2A 0.01 Orthogroups_2024-Update
Kfl00106_0060 kfl00106_0060_v1.1 (at2g20140 : 736.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Solyc06g083620 No alias 26S protease regulatory subunit (AHRD V3.3 *** A0A199VGJ0_ANACO) 0.03 Orthogroups_2024-Update
evm.model.contig_3833.1 No alias (at4g29040 : 350.0) 26S proteasome AAA-ATPase subunit... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 115 165
IPR003959 ATPase_AAA_core 228 361
No external refs found!